CDS

Accession Number TCMCG017C22317
gbkey CDS
Protein Id OMO78905.1
Location complement(join(151161..151247,151950..152116,153614..153788,154643..154804,155436..155601,155975..156083,156166..156260,156484..156619,156739..156814,157476..157574,158284..158432,159665..159875,160012..160146,161032..161104,161217..161389,161495..161728))
GeneID InterPro:IPR002099
Organism Corchorus olitorius
locus_tag COLO4_24646

Protein

Length 748aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01018684.1
Definition DNA mismatch repair protein [Corchorus olitorius]
Locus_tag COLO4_24646

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein
KEGG_TC -
KEGG_Module M00295        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08734        [VIEW IN KEGG]
EC -
KEGG_Pathway ko01524        [VIEW IN KEGG]
ko03430        [VIEW IN KEGG]
ko03460        [VIEW IN KEGG]
ko05200        [VIEW IN KEGG]
ko05210        [VIEW IN KEGG]
ko05213        [VIEW IN KEGG]
ko05226        [VIEW IN KEGG]
map01524        [VIEW IN KEGG]
map03430        [VIEW IN KEGG]
map03460        [VIEW IN KEGG]
map05200        [VIEW IN KEGG]
map05210        [VIEW IN KEGG]
map05213        [VIEW IN KEGG]
map05226        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0002200        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0002377        [VIEW IN EMBL-EBI]
GO:0002440        [VIEW IN EMBL-EBI]
GO:0002520        [VIEW IN EMBL-EBI]
GO:0002566        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005712        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006312        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009845        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0016445        [VIEW IN EMBL-EBI]
GO:0016446        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032300        [VIEW IN EMBL-EBI]
GO:0032389        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090351        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATATAGAAACAGAAATAACAGGAGAAGCCAAGGAGCCGCCGAGAATCCACCGTCTGGACGAGTCGGTGGTCAATCGAATTGCTGCCGGAGAGGTAATCCAACGCCCAGTCTCCGCCGTGAAAGAGCTGGTCGAGAACAGTTTAGACGCTTCCTCAACTTCCATAAGCGTCCTCGTCAAGGACGGTGGCCTTAAACTCATTCAAGTTTCCGACGACGGCCACGGCATTCGACATGAAGACTTGCCAATATTATGCGAGAGGCACACAACTTCGAAGTTGTCCAAATACGAGGATTTGCAGTCAATAAAGTCGATGGGGTTTAGAGGGGAGGCGTTGGCGAGCATGACTTATGTGGGTCATGTGACTGTCACCACAATTACCAAAGGCCAATTGCATGGTTATAGGGTTTCCTACAGAGATGGTGTGATGGAACATGAACCCAGGGCATGTGCTGCTGTCAAAGGAACCCAGATAATGGTTGAGAATTTGTTCTATAACATGATTGCCAGAAGGAAGACACTGCAAAATTCTGCAGATGATTATACAAAAATTGTGGACTTGCTAAGCCGGTTTGCCATACATCATATTGATGTGAGCTTTTCTTGTAGAAAGCATGGAGCTGCTAGAGCAGATGTTCACTCGGTTGCAACAGCATCAAGGCTCGATGCTATTAGATCTGTTTATGGGCTCTTGGTTGCTCGCAATCTGATCAAAATCGAAGCTTCAGATAATGATCCCTCTAGTTCAGTCTTCAAGATGGATGGCTTCATCTCCAATGCAAATTATGTTGCAAAGAAAACAACAATGGTGCTTTTCATCAATGATAGATTGGTTGAATGCACTGCTTTGAAGAGAGCTCTTGAAGTTGTTTATGCTGCAACCTTACCAAAAGCATCAAAGCCCTTTGTATATATGTCAATTATATTACCACCTGAGCATGTTGATGTCAACGTGCACCCAACAAAGAGAGAGGTCAGCCTTTTAAATCAGGAAGTTATTATTGAAAAGATACAATCTGTGGTTGAATCAATGTTGAGAGACTCAAACAAGACAAGGACATTTCAAGAACAGACAGTGGAACCCTCTACCTCTGTTCCCTCGATATCAAACAATGATTTAGACCTTAATCCCTCATCCTCTGGTAATGGATCAAAATCACAGAAAGTTCCTGTGCACAAAATGGTAAGAATAGATTCATCTGATCCTGCAGGAAGGTTGCATGCCTACTTGAATACAAAACCCCGGAACCACCTTGAAATCAATTCTAGCTTGACAGCTGTGAGGTCATCTGTAAGACAAAGAAGGAACCTGAAAGAAACTGCAGATCTTTCAAGCATTCAGCAGCTTCTCAATGATATTGAAAGCAAAACTCACTCTGGTCTGCTCGATATTGTTCAACACTGCACGTATGTTGGAATGGCAGATGATGTTTTTGCATTGCTCCAGCATAATACACATCTATATCTTGCTAATGTGGTGAACTTAAGCAAAGAGCTCATGTATCAGCAAGTTATTCGTCGATTTGGTCATTTTAATGCTATCCAACTAAGTGAACCAGCTCCCTTGCAAGAGTTAATTATGTTGGCCCTGAAGGAGGAGGACTTGGACCTAGATTGCAATGAAAATGATGACCTGAAAAGGAAGATTGCAGAAATGAATATGCAGTTGCTTAAGCAAAAGACTGAAATGCTAGAGGAGTATTTCGGCATTTCTATTGATCCGGATGGGAATTTGTTGAGGCTTCCAATTTTACTTGATCAGTACACTCCAGACATGGATCGTGTTCCGGAATTTGCTCTATGCATGGGAAATGATGTTGACTGGGAAGAAGAAAAAAGTTGCTTACAATCACTTGCAGCTGCTCTTGGGAATTTTTATGCCATGCATCCTCCTTTGTTGCCAAATCCATCAGGTGAAGGATTGGAATTTTATAAAAAGAGAAAACATGAGAAGAATTCTCAGGATGCTGGAAATTCTTCTTCTGACCGTGGGGATGATGAAATTAAAATAGAGGATGAATTTGAGCAAGAACTACTTTCAGAGGCAGAGACTGCATGGGCCCAGCGTGAATGGTCAATCCAACATGTCTTGTTTTCATCCATGAAACTCTTTCTAAAGCCTCCAACTTCAATGGCTGTTAATGGAACATTTGTCAAGGAATTGTGGCAGCTAAACATCAAAGGCTCTAGCCTCCATAAGCTGTTGCATTTTGAAATTCAGTTTTCCGGTATACTGCGAATGTAA
Protein:  
MDIETEITGEAKEPPRIHRLDESVVNRIAAGEVIQRPVSAVKELVENSLDASSTSISVLVKDGGLKLIQVSDDGHGIRHEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGQLHGYRVSYRDGVMEHEPRACAAVKGTQIMVENLFYNMIARRKTLQNSADDYTKIVDLLSRFAIHHIDVSFSCRKHGAARADVHSVATASRLDAIRSVYGLLVARNLIKIEASDNDPSSSVFKMDGFISNANYVAKKTTMVLFINDRLVECTALKRALEVVYAATLPKASKPFVYMSIILPPEHVDVNVHPTKREVSLLNQEVIIEKIQSVVESMLRDSNKTRTFQEQTVEPSTSVPSISNNDLDLNPSSSGNGSKSQKVPVHKMVRIDSSDPAGRLHAYLNTKPRNHLEINSSLTAVRSSVRQRRNLKETADLSSIQQLLNDIESKTHSGLLDIVQHCTYVGMADDVFALLQHNTHLYLANVVNLSKELMYQQVIRRFGHFNAIQLSEPAPLQELIMLALKEEDLDLDCNENDDLKRKIAEMNMQLLKQKTEMLEEYFGISIDPDGNLLRLPILLDQYTPDMDRVPEFALCMGNDVDWEEEKSCLQSLAAALGNFYAMHPPLLPNPSGEGLEFYKKRKHEKNSQDAGNSSSDRGDDEIKIEDEFEQELLSEAETAWAQREWSIQHVLFSSMKLFLKPPTSMAVNGTFVKELWQLNIKGSSLHKLLHFEIQFSGILRM